C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SIK family kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122865 Sik3-002 ENSMUSG00000034135 10090 + 9:46123237-46202885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122865 3.632±0.40 3.146±0.00 2.416±0.00 4.419±2.97 3.000±0.30 3.340±0.15 7.475±1.26 3.611±0.17 2.224±1.08 3.094±0.04 5.599±0.73 6.964±2.24 7.236±6.81 4.891±1.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000122372 SIK3-201 protein_coding Danio_rerio 0 429
ENST00000375300 SIK3-001 protein_coding Homo_sapiens 0 1923
ENST00000413553 SIK3-003 protein_coding Homo_sapiens 0 2802
ENST00000415541 SIK3-013 nonsense_mediated_decay Homo_sapiens 0 1711
ENST00000445177 SIK3-002 protein_coding Homo_sapiens 0 1930
ENST00000446921 SIK3-014 protein_coding Homo_sapiens 0 1022
ENST00000472648 SIK3-010 retained_intron Homo_sapiens 0 267
ENST00000480222 SIK3-011 retained_intron Homo_sapiens 0 320
ENST00000485363 SIK3-007 processed_transcript Homo_sapiens 0 436
ENST00000488337 SIK3-004 processed_transcript Homo_sapiens 9e-39 167
ENST00000497049 SIK3-008 processed_transcript Homo_sapiens 0 776

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