C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SIK family kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375300 SIK3-001 ENSG00000160584 9606 - 11:116843402-117098421 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartMuscleOvaryTestisENST00000375300
Transcript ID Adipose Brain Colon Heart Muscle Ovary Testis
ENST00000375300 1.861±0.00 5.371±2.98 1.019±0.25 3.485±0.00 2.936±1.66 1.304±0.09 4.436±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EK CIL_0008EK_0001 VISTA 11:116351165-116951910
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0001958 IEA endochondral ossification
GO:0004672 IEA protein kinase activity
GO:0004674 IEA:IDA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA:IDA ATP binding
GO:0005737 IEA cytoplasm
GO:0006468 IEA:IDA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0032880 IEA regulation of protein localization
GO:0035108 IEA limb morphogenesis
GO:0035264 IEA multicellular organism growth
GO:0048705 IEA skeletal system morphogenesis
GO:0060351 IEA cartilage development involved in endochondral bone morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120463 Sik3-005 protein_coding Mus_musculus 0 4793
ENSMUST00000153152 Sik3-003 processed_transcript Mus_musculus 0 2662
ENSMUST00000126865 Sik3-001 protein_coding Mus_musculus 0 2508
ENSMUST00000122865 Sik3-002 protein_coding Mus_musculus 0 1923
ENSMUST00000120247 Sik3-004 protein_coding Mus_musculus 0 1280
ENSDART00000129547 CABZ01087568.1-201 protein_coding Danio_rerio 2e-21 110

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