C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage stimulation factor, 3' pre-RNA, subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122900 Cstf3-003 ENSMUSG00000027176 10090 + 2:104590532-104611406 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartLiverLungMuscleOvaryENSMUST00000122900
Transcript ID Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary
ENSMUST00000122900 1.358±0.48 1.669±0.23 5.061±2.87 0.757±0.06 0.440±0.09 1.554±0.75 1.396±0.05 0.374±0.11 1.245±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323959 CSTF3-001 protein_coding Homo_sapiens 0 446
ENST00000431742 CSTF3-003 protein_coding Homo_sapiens 0 383
ENST00000438862 CSTF3-002 protein_coding Homo_sapiens 0 961
ENST00000524556 CSTF3-008 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000524775 CSTF3-004 protein_coding Homo_sapiens 0 331
ENST00000524827 CSTF3-007 protein_coding Homo_sapiens 0 353
ENST00000526480 CSTF3-006 processed_transcript Homo_sapiens 0 442

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