C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 78, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122929 Fam78b-003 ENSMUSG00000060568 10090 + 1:167001580-167088724 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000122929
Transcript ID Adipose Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000122929 0.428±0.00 0.493±0.14 0.169±0.05 0.061±0.04 0.298±0.11 0.797±0.23 7.261±1.29 0.041±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091431 FAM78B (1 of 2)-201 protein_coding Danio_rerio 0 370
ENST00000247295 FAM78A-003 processed_transcript Homo_sapiens 0 270
ENST00000338353 FAM78B-201 protein_coding Homo_sapiens 0 1519
ENST00000354422 FAM78B-001 protein_coding Homo_sapiens 0 1520
ENST00000372269 FAM78A-002 protein_coding Homo_sapiens 0 270
ENST00000372271 FAM78A-001 protein_coding Homo_sapiens 0 377
ENST00000435676 FAM78B-002 nonsense_mediated_decay Homo_sapiens 0 1772
ENST00000441649 FAM78B-003 nonsense_mediated_decay Homo_sapiens 0 1951
ENST00000456900 FAM78B-004 nonsense_mediated_decay Homo_sapiens 0 1786
ENST00000464831 FAM78A-004 protein_coding Homo_sapiens 0 270

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