C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 78, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060568 Fam78b 10090 + 1:167001417-167091302 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000122929 Fam78b-003 167001580-167088724 nonsense_mediated_decay
  ENSMUST00000126198 Fam78b-001 167001466-167079281 protein_coding
  ENSMUST00000128373 Fam78b-002 167001589-167091009 nonsense_mediated_decay
  ENSMUST00000156025 Fam78b-004 167001432-167089077 nonsense_mediated_decay
  ENSMUST00000165874 Fam78b-201 167001417-167091302 protein_coding
  ENSMUST00000190081 Fam78b-202 167001417-167091302 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122929ENSMUST00000126198ENSMUST00000128373ENSMUST00000156025ENSMUST00000165874ENSMUST00000190081
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122929 0.428±0.00 N/A N/A N/A 0.493±0.14 N/A N/A 0.169±0.05 0.061±0.04 N/A 0.298±0.11 0.797±0.23 7.261±1.29 0.041±0.01
ENSMUST00000126198 3.159±1.23 2.420±0.54 6.458±1.00 9.914±3.15 1.781±0.39 0.713±0.20 1.117±0.30 0.722±0.20 0.111±0.05 1.796±0.56 N/A 3.569±0.78 18.789±9.45 0.275±0.19
ENSMUST00000128373 0.478±0.12 1.059±0.06 1.871±0.63 7.860±5.49 0.480±0.22 0.209±0.03 0.242±0.03 0.157±0.05 0.031±0.00 0.753±0.10 0.504±0.12 0.413±0.17 3.161±1.96 0.024±0.02
ENSMUST00000156025 N/A N/A N/A 2.006±0.00 0.693±0.00 0.342±0.14 N/A N/A N/A 0.488±0.00 0.345±0.17 N/A 2.493±0.61 0.003±0.00
ENSMUST00000165874 N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 0.008±0.00 N/A N/A N/A N/A 0.050±0.00
ENSMUST00000190081 0.310±0.00 N/A N/A 2.641±0.00 0.251±0.09 0.067±0.00 0.306±0.00 0.119±0.00 0.023±0.02 N/A 0.082±0.00 0.069±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062889 FAM78B (1 of 2) family with sequence similarity 78, member B protein_coding Danio_rerio
ENSDARG00000063018 FP102157.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000188859 FAM78B family with sequence similarity 78, member B protein_coding Homo_sapiens

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