C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: immature colon carcinoma transcript 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122946 Ict1-005 ENSMUSG00000018858 10090 + 11:115403771-115410261 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000122946
Transcript ID Liver
ENSMUST00000122946 59.897±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_00008O CIL_00008O_0002 CGP 11:115381916-115412674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301585 ICT1-001 protein_coding Homo_sapiens 1.96182e-44 183
ENST00000580800 ICT1-002 nonsense_mediated_decay Homo_sapiens 9.80909e-45 183
ENST00000584208 ICT1-004 protein_coding Homo_sapiens 1e-34 150

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