C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SHANK-associated RH domain interacting protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000123112  |
Sharpin-002 |
ENSMUSG00000022552 |
10090 | - |
15:76347040-76351110  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SS | CIL_0007SS_0002 | VISTA | 15:76102685-76704351 |
| CIL_00026W | CIL_00026W_0002 | CGP | 15:76343523-76351111 |
| CIL_0006Y3 | CIL_0006Y3_0003 | CGP | 15:76347040-76354380 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000359551
|
SHARPIN-002 | nonsense_mediated_decay | Homo_sapiens | 6.00036e-42 | 176 |
|
ENST00000398712
|
SHARPIN-001 | protein_coding | Homo_sapiens | 1.99965e-42 | 178 |
|
ENST00000532536
|
SHARPIN-011 | protein_coding | Homo_sapiens | 1.99993e-41 | 172 |
