C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SHANK-associated RH domain interactor | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000532536  |
SHARPIN-011 |
ENSG00000179526 |
9606 | - |
8:144098633-144099322  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SS | CIL_0007SS_0001 | VISTA | 8:143880613-144482307 |
| CIL_00026W | CIL_00026W_0001 | CGP | 8:144095027-144108124 |
| CIL_0006Y3 | CIL_0006Y3_0002 | CGP | 8:144098633-144108124 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008270 | IEA | zinc ion binding |
| GO:0071797 | IEA | LUBAC complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000144816
|
Sharpin-003 | retained_intron | Mus_musculus | 0 | 191 |
|
ENSMUST00000154477
|
Sharpin-004 | retained_intron | Mus_musculus | 0 | 191 |
|
ENSMUST00000023211
|
Sharpin-001 | protein_coding | Mus_musculus | 0 | 191 |
|
ENSMUST00000159429
|
Sharpin-008 | protein_coding | Mus_musculus | 1.4013e-45 | 187 |
|
ENSMUST00000147001
|
Sharpin-009 | retained_intron | Mus_musculus | 1.99993e-41 | 172 |
|
ENSMUST00000123112
|
Sharpin-002 | retained_intron | Mus_musculus | 1.99993e-41 | 172 |
