C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ly1 antibody reactive clone
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123207 Lyar-004 ENSMUSG00000067367 10090 + 5:38220520-38227915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverENSMUST00000123207
Transcript ID Adipose Adrenal Colon Kidney Liver
ENSMUST00000123207 0.622±0.00 1.812±0.00 0.582±0.00 1.220±0.00 0.861±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096B CIL_00096B_0002 VISTA 5:37667623-38269196
CIL_0008QQ CIL_0008QQ_0002 VISTA 5:37760247-38361421
CIL_00096M CIL_00096M_0002 VISTA 5:37765055-38366694
CIL_0008ZA CIL_0008ZA_0002 VISTA 5:37806142-38406996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343470 LYAR-001 protein_coding Homo_sapiens 0 370
ENST00000452476 LYAR-201 protein_coding Homo_sapiens 0 370
ENST00000513174 LYAR-002 protein_coding Homo_sapiens 0 300

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