C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, matrin type 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123412 Zmat4-002 ENSMUSG00000037492 10090 + 8:23669658-24156585 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyOvaryENSMUST00000123412
Transcript ID Adrenal Breast Colon Kidney Ovary
ENSMUST00000123412 0.187±0.08 0.249±0.10 0.091±0.02 0.242±0.00 0.118±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AU CIL_0003AU_0002 CGP 8:23411502-24156585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297737 ZMAT4-002 protein_coding Homo_sapiens 0 865
ENST00000315769 ZMAT4-001 protein_coding Homo_sapiens 0 560
ENST00000518242 ZMAT4-008 retained_intron Homo_sapiens 0 318
ENST00000519406 ZMAT4-003 protein_coding Homo_sapiens 0 723
ENST00000519806 ZMAT4-009 retained_intron Homo_sapiens 0 320
ENST00000522623 ZMAT4-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000523188 ZMAT4-007 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000523542 ZMAT4-005 nonsense_mediated_decay Homo_sapiens 0 296

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