C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13235
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123460 Gm13235-001 ENSMUSG00000078500 10090 + 4:145868794-145899975 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverOvaryPlacentaTestisENSMUST00000123460
Transcript ID Adipose Bladder Brain Breast Liver Ovary Placenta Testis
ENSMUST00000123460 0.105±0.00 0.005±0.00 0.018±0.00 0.111±0.00 0.012±0.01 0.022±0.01 0.072±0.06 0.034±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228289 ZNF268-002 protein_coding Homo_sapiens 6e-25 121
ENST00000250076 ZNF232-001 protein_coding Homo_sapiens 0.0000000000007 81
ENST00000282869 ZNF117-002 protein_coding Homo_sapiens 0 215
ENST00000291598 ZNF583-201 protein_coding Homo_sapiens 2e-18 99
ENST00000305127 ZNF182-201 protein_coding Homo_sapiens 0 200
ENST00000308031 ZNF471-001 protein_coding Homo_sapiens 1e-24 121
ENST00000328550 ZNF571-201 protein_coding Homo_sapiens 0.0000000000003 82
ENST00000330619 ZNF470-001 protein_coding Homo_sapiens 2e-28 134
ENST00000332591 ZNF484-002 protein_coding Homo_sapiens 8e-33 147
ENST00000333201 ZNF583-001 protein_coding Homo_sapiens 4e-18 99
ENST00000334564 ZNF480-005 protein_coding Homo_sapiens 0 206
ENST00000335090 ZNF480-003 protein_coding Homo_sapiens 0 206
ENST00000338637 ZNF81-201 protein_coding Homo_sapiens 4e-20 106
ENST00000358744 ZNF571-003 protein_coding Homo_sapiens 0.0000000000002 82
ENST00000372699 ZNF684-001 protein_coding Homo_sapiens 1e-25 122
ENST00000375495 ZNF484-001 protein_coding Homo_sapiens 8e-33 147
ENST00000376943 ZNF182-001 protein_coding Homo_sapiens 0 200
ENST00000376954 ZNF81-001 protein_coding Homo_sapiens 4e-20 106
ENST00000391709 ZNF470-201 protein_coding Homo_sapiens 2e-28 134
ENST00000395505 ZNF484-201 protein_coding Homo_sapiens 1e-32 147
ENST00000395506 ZNF484-202 protein_coding Homo_sapiens 1e-32 147
ENST00000396965 ZNF182-002 protein_coding Homo_sapiens 0 200
ENST00000414387 ZNF674-004 protein_coding Homo_sapiens 5.04467e-44 183
ENST00000422689 ZNF880-001 protein_coding Homo_sapiens 5.04467e-44 183
ENST00000451802 ZNF571-001 protein_coding Homo_sapiens 0.0000000000002 82
ENST00000468240 ZNF480-007 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000490272 ZNF480-002 protein_coding Homo_sapiens 0 206
ENST00000493756 ZNF684-005 processed_transcript Homo_sapiens 6e-26 122
ENST00000523374 ZNF674-001 protein_coding Homo_sapiens 8.96831e-44 183
ENST00000536435 ZNF268-001 protein_coding Homo_sapiens 2e-24 121
ENST00000536899 ZNF268-003 protein_coding Homo_sapiens 6e-25 121
ENST00000541009 ZNF268-012 protein_coding Homo_sapiens 7e-25 121
ENST00000542986 ZNF268-009 protein_coding Homo_sapiens 7e-25 121
ENST00000570486 ZNF232-002 nonsense_mediated_decay Homo_sapiens 0.0000000000007 81
ENST00000573015 ZNF232-003 nonsense_mediated_decay Homo_sapiens 0.0000000000005 81
ENST00000574735 ZNF232-004 retained_intron Homo_sapiens 0.0000000000006 81
ENST00000575898 ZNF232-005 protein_coding Homo_sapiens 0.0000000000005 81
ENST00000585612 ZNF583-006 processed_transcript Homo_sapiens 2e-18 99
ENST00000591537 ZNF471-002 protein_coding Homo_sapiens 1e-24 121
ENST00000593133 ZNF571-002 protein_coding Homo_sapiens 0.0000000000002 82
ENST00000595962 ZNF480-001 protein_coding Homo_sapiens 0 206
ENST00000620222 ZNF117-202 protein_coding Homo_sapiens 0 215

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