C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitously expressed transcript
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123836 Uxt-001 ENSMUSG00000001134 10090 - X:20951662-20962017 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000123836
Transcript ID Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000123836 6.673±0.17 7.433±2.15 9.125±1.00 6.993±2.68 7.443±0.65 4.860±0.56 6.539±0.88 2.280±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000577 CIL_000577_0002 CGP X:20925454-20950608
CIL_000578 CIL_000578_0002 CGP X:20933395-20962017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000930 IEA gamma-tubulin complex
GO:0001106 IEA RNA polymerase II transcription corepressor activity
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005815 IEA microtubule organizing center
GO:0005856 IEA cytoskeleton
GO:0006457 IEA protein folding
GO:0016272 IEA prefoldin complex
GO:0048487 IEA beta-tubulin binding
GO:0051082 IEA unfolded protein binding
GO:0051297 IEA centrosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333119 UXT-001 protein_coding Homo_sapiens 0 697
ENST00000335890 UXT-002 protein_coding Homo_sapiens 0 686
ENST00000376964 UXT-003 retained_intron Homo_sapiens 3e-38 163
ENST00000460840 UXT-004 processed_transcript Homo_sapiens 0 350
ENST00000485641 UXT-005 nonsense_mediated_decay Homo_sapiens 0 350

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