C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTF2I repeat domain containing 2 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618962 GTF2IRD2P1-003 ENSG00000214544 9606 - 7:73242751-73266840 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverMuscleOvaryPlacentaENST00000618962
Transcript ID Brain Breast Colon Liver Muscle Ovary Placenta
ENST00000618962 0.042±0.00 0.014±0.00 0.038±0.01 0.050±0.00 0.110±0.00 0.074±0.05 0.056±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0001 CGP 7:72959485-73308867

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016086 Gtf2ird2-001 protein_coding Mus_musculus 0 1452
ENSMUST00000123941 Gtf2ird2-002 nonsense_mediated_decay Mus_musculus 0 486
ENSMUST00000128842 Gtf2ird2-003 retained_intron Mus_musculus 0 473

Loading