C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 6 superfamily member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124616 Tm6sf1-003 ENSMUSG00000038623 10090 + 7:81859020-81873877 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverMusclePlacentaENSMUST00000124616
Transcript ID Bladder Breast Colon Liver Muscle Placenta
ENSMUST00000124616 2.005±0.00 2.588±0.00 0.801±0.00 1.258±0.65 0.434±0.07 0.624±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L6 CIL_0001L6_0002 CGP 7:81859001-81934473

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258909 TM6SF1-004 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000322019 TM6SF1-001 protein_coding Homo_sapiens 0 843
ENST00000379384 TM6SF1-003 nonsense_mediated_decay Homo_sapiens 0 538
ENST00000379390 TM6SF1-006 protein_coding Homo_sapiens 0 667
ENST00000564988 TM6SF1-008 processed_transcript Homo_sapiens 0 394
ENST00000565774 TM6SF1-005 protein_coding Homo_sapiens 0 782
ENST00000565982 TM6SF1-009 protein_coding Homo_sapiens 0 651

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