C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125132 P4ha2-005 ENSMUSG00000018906 10090 + 11:54101068-54111574 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004656 IDA procollagen-proline 4-dioxygenase activity
GO:0005515 IPI protein binding
GO:0016222 IDA procollagen-proline 4-dioxygenase complex
GO:0018401 IDA peptidyl-proline hydroxylation to 4-hydroxy-L-proline

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000166534 P4HA2-003 protein_coding Homo_sapiens 0 296
ENST00000360568 P4HA2-002 protein_coding Homo_sapiens 0 296
ENST00000379086 P4HA2-004 protein_coding Homo_sapiens 0 296
ENST00000379100 P4HA2-201 protein_coding Homo_sapiens 0 296
ENST00000379104 P4HA2-202 protein_coding Homo_sapiens 0 296
ENST00000395164 P4HA2-017 protein_coding Homo_sapiens 0 296
ENST00000401867 P4HA2-001 protein_coding Homo_sapiens 0 296
ENST00000416053 P4HA2-011 protein_coding Homo_sapiens 0 274
ENST00000417528 P4HA2-010 protein_coding Homo_sapiens 0 296
ENST00000418055 P4HA2-016 protein_coding Homo_sapiens 0 296
ENST00000428369 P4HA2-009 protein_coding Homo_sapiens 0 296
ENST00000431054 P4HA2-014 protein_coding Homo_sapiens 0 296
ENST00000439698 P4HA2-015 protein_coding Homo_sapiens 0 296
ENST00000453286 P4HA2-005 protein_coding Homo_sapiens 0 296
ENST00000478055 P4HA2-006 retained_intron Homo_sapiens 3e-28 130

Loading