C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prolyl 4-hydroxylase, alpha polypeptide II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418055 P4HA2-016 ENSG00000072682 9606 - 5:132214041-132227835 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093D CIL_00093D_0001 VISTA 5:131965137-132566411
CIL_0007RF CIL_0007RF_0001 VISTA 5:131967147-132570227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004656 IEA procollagen-proline 4-dioxygenase activity
GO:0005783 IEA endoplasmic reticulum
GO:0016702 IEA oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138477 P4ha2-015 protein_coding Mus_musculus 0 387
ENSMUST00000174616 P4ha2-016 protein_coding Mus_musculus 0 387
ENSMUST00000019050 P4ha2-002 protein_coding Mus_musculus 0 387
ENSMUST00000125651 P4ha2-003 retained_intron Mus_musculus 0 387
ENSMUST00000093107 P4ha2-001 protein_coding Mus_musculus 0 387
ENSMUST00000151218 P4ha2-009 protein_coding Mus_musculus 0 387
ENSMUST00000135653 P4ha2-006 protein_coding Mus_musculus 0 381
ENSMUST00000126840 P4ha2-013 protein_coding Mus_musculus 0 381
ENSMUST00000135596 P4ha2-011 retained_intron Mus_musculus 0 381
ENSMUST00000125132 P4ha2-005 nonsense_mediated_decay Mus_musculus 0 296
ENSMUST00000141258 P4ha2-007 nonsense_mediated_decay Mus_musculus 2e-17 94
ENSMUST00000129499 P4ha2-010 protein_coding Mus_musculus 0.0000000001 71

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