C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125238 Capn3-012 ENSMUSG00000079110 10090 + 2:120500242-120503216 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PL CIL_0005PL_0002 CGP 2:120355312-120461700
CIL_0004QL CIL_0004QL_0003 CGP 2:120403896-120504913
CIL_0004QM CIL_0004QM_0003 CGP 2:120456019-120563843

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318023 CAPN3-201 protein_coding Homo_sapiens 0 547
ENST00000337571 CAPN3-006 protein_coding Homo_sapiens 0 422
ENST00000349748 CAPN3-005 protein_coding Homo_sapiens 0 422
ENST00000356316 CAPN3-202 protein_coding Homo_sapiens 0 431
ENST00000357568 CAPN3-008 protein_coding Homo_sapiens 0 547
ENST00000397163 CAPN3-009 protein_coding Homo_sapiens 0 547
ENST00000397200 CAPN3-007 protein_coding Homo_sapiens 0 547
ENST00000397204 CAPN3-012 protein_coding Homo_sapiens 0 424
ENST00000466222 CAPN3-014 retained_intron Homo_sapiens 0 431
ENST00000561817 CAPN3-013 protein_coding Homo_sapiens 0 422
ENST00000562199 CAPN3-020 processed_transcript Homo_sapiens 0 327
ENST00000564503 CAPN3-019 protein_coding Homo_sapiens 0 333
ENST00000565173 CAPN3-016 retained_intron Homo_sapiens 1e-29 134
ENST00000565274 CAPN3-018 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000565559 CAPN3-017 protein_coding Homo_sapiens 0 424
ENST00000567071 CAPN3-011 protein_coding Homo_sapiens 0 248
ENST00000569136 CAPN3-015 protein_coding Homo_sapiens 0 547
ENST00000569827 CAPN3-010 protein_coding Homo_sapiens 0 422

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