C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | calpain 3, (p94) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000565274  |
CAPN3-018 |
ENSG00000092529 |
9606 | + |
15:42405932-42411863  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004QL | CIL_0004QL_0002 | CGP | 15:42273233-42412318 |
| CIL_0004QM | CIL_0004QM_0002 | CGP | 15:42359500-42491123 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004198 | IEA | calcium-dependent cysteine-type endopeptidase activity |
| GO:0005509 | IEA | calcium ion binding |
| GO:0006508 | IEA | proteolysis |
| GO:0045214 | IEA | sarcomere organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000028749
|
Capn3-001 | protein_coding | Mus_musculus | 0 | 383 |
|
ENSMUST00000125238
|
Capn3-012 | processed_transcript | Mus_musculus | 0 | 366 |
|
ENSMUST00000110719
|
Capn3-006 | protein_coding | Mus_musculus | 0 | 316 |
|
ENSMUST00000090028
|
Capn3-005 | protein_coding | Mus_musculus | 0 | 316 |
|
ENSMUST00000028748
|
Capn3-004 | protein_coding | Mus_musculus | 0 | 316 |
|
ENSMUST00000110716
|
Capn3-003 | protein_coding | Mus_musculus | 0 | 316 |
|
ENSMUST00000110721
|
Capn3-002 | protein_coding | Mus_musculus | 0 | 316 |
|
ENSMUST00000145993
|
Capn3-007 | processed_transcript | Mus_musculus | 0 | 316 |
|
ENSMUST00000124129
|
Capn3-009 | processed_transcript | Mus_musculus | 0 | 316 |
|
ENSMUST00000139336
|
Capn3-008 | processed_transcript | Mus_musculus | 0 | 315 |
|
ENSMUST00000141181
|
Capn3-013 | processed_transcript | Mus_musculus | 0 | 243 |
|
ENSMUST00000151342
|
Capn3-010 | processed_transcript | Mus_musculus | 0 | 241 |
