C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-1,4-N-acetyl-galactosaminyl transferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125341 B4galnt3-002 ENSMUSG00000041372 10090 - 6:120203073-120242643 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000125341
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125341 0.026±0.02 1.280±0.00 0.264±0.00 0.161±0.08 10.269±5.40 0.097±0.04 0.554±0.26 0.102±0.03 0.153±0.10 0.746±0.19 0.746±0.29 1.362±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TY CIL_0007TY_0002 VISTA 6:119665436-120266145
CIL_0008AW CIL_0008AW_0002 VISTA 6:119874234-120475208
CIL_00083Y CIL_00083Y_0002 VISTA 6:120053928-120655330

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266383 B4GALNT3-001 protein_coding Homo_sapiens 0 2612
ENST00000322843 B4GALNT3-008 protein_coding Homo_sapiens 0 1421
ENST00000535680 B4GALNT3-002 retained_intron Homo_sapiens 0 656
ENST00000540836 B4GALNT3-005 retained_intron Homo_sapiens 0 241
ENST00000544638 B4GALNT3-007 processed_transcript Homo_sapiens 0 614

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