C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-1,4-N-acetyl-galactosaminyl transferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000266383 B4GALNT3-001 ENSG00000139044 9606 + 12:460364-563509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000266383
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000266383 0.290±0.00 0.289±0.00 0.784±0.00 0.506±0.09 0.272±0.00 3.540±0.00 0.062±0.00 0.168±0.00 2.901±2.73 0.145±0.00 1.173±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083Y CIL_00083Y_0001 VISTA 12:106900-709490
CIL_0008AW CIL_0008AW_0001 VISTA 12:291137-892234

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0008376 IDA:IEA acetylgalactosaminyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0032580 IEA Golgi cisterna membrane
GO:0033842 IEA N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057283 B4galnt3-001 protein_coding Mus_musculus 0 2813
ENSMUST00000125341 B4galnt3-002 processed_transcript Mus_musculus 0 2612

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