C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110004E09 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125519 1110004E09Rik-006 ENSMUSG00000022972 10090 - 16:90925970-90934927 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000125519
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000125519 3.396±0.67 7.415±1.45 7.742±5.20 5.654±2.36 8.085±2.50 1.959±0.73 2.751±0.73 1.867±0.98 10.720±3.29 14.559±3.14 65.374±79.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069
CIL_00087M CIL_00087M_0002 VISTA 16:90839145-91442270
CIL_0009BQ CIL_0009BQ_0002 VISTA 16:90840152-91441411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290155 C21orf59-001 protein_coding Homo_sapiens 0 531
ENST00000300260 C21orf59-003 nonsense_mediated_decay Homo_sapiens 0 793
ENST00000382549 C21orf59-002 protein_coding Homo_sapiens 0 337
ENST00000431216 AP000275.65-003 protein_coding Homo_sapiens 0 433
ENST00000440966 C21orf59-006 protein_coding Homo_sapiens 0 339
ENST00000458138 C21orf59-007 protein_coding Homo_sapiens 0 265
ENST00000483315 C21orf59-008 retained_intron Homo_sapiens 0 335
ENST00000553001 AP000275.65-002 protein_coding Homo_sapiens 0 337

Loading