C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125877 Ift46-006 ENSMUSG00000002031 10090 + 9:44773100-44784049 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000125877
Transcript ID Placenta
ENSMUST00000125877 8.866±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005929 IDA cilium
GO:0007224 IMP smoothened signaling pathway
GO:0015031 ISO protein transport
GO:0030992 IDA intraciliary transport particle B
GO:0031512 IDA motile primary cilium
GO:0031514 ISO motile cilium
GO:0031647 ISO regulation of protein stability
GO:0035082 ISO axoneme assembly
GO:0042073 IBA intraciliary transport
GO:0042384 IMP cilium assembly
GO:0044782 ISO cilium organization
GO:0060170 ISO ciliary membrane
GO:0060285 ISO cilium-dependent cell motility
GO:0072372 IDA primary cilium
GO:0097546 ISO ciliary base
GO:1902017 ISO regulation of cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264020 IFT46-013 protein_coding Homo_sapiens 0 287
ENST00000264021 IFT46-001 protein_coding Homo_sapiens 0 335
ENST00000525060 IFT46-011 retained_intron Homo_sapiens 0 191
ENST00000530872 IFT46-002 protein_coding Homo_sapiens 0 287
ENST00000531201 IFT46-010 retained_intron Homo_sapiens 0 285
ENST00000531939 IFT46-009 protein_coding Homo_sapiens 0 335
ENST00000534156 IFT46-006 protein_coding Homo_sapiens 0 335

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