C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264020 IFT46-013 ENSG00000118096 9606 - 11:118544543-118566035 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000264020
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000264020 1.806±0.00 0.858±0.00 1.925±0.17 1.885±0.00 6.322±0.00 3.224±0.00 1.323±0.69 1.856±0.00 0.655±0.00 3.057±2.13 0.732±0.35 6.179±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0001 VISTA 11:118137591-118740525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IBA centrosome
GO:0005929 IBA cilium
GO:0007224 IEA smoothened signaling pathway
GO:0008022 ISS protein C-terminus binding
GO:0008150 ND biological_process
GO:0030992 IBA intraciliary transport particle B
GO:0031512 IEA motile primary cilium
GO:0031514 ISS motile cilium
GO:0036064 ISS ciliary basal body
GO:0042073 IEA:ISS intraciliary transport
GO:0042384 ISS cilium assembly
GO:0050821 ISS protein stabilization
GO:0072372 IEA primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118186 Ift46-002 protein_coding Mus_musculus 0 950
ENSMUST00000002099 Ift46-001 protein_coding Mus_musculus 0 950
ENSMUST00000142586 Ift46-012 processed_transcript Mus_musculus 0 414
ENSMUST00000125877 Ift46-006 protein_coding Mus_musculus 0 287

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