C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 44
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125927 Rnf44-007 ENSMUSG00000034928 10090 - 13:54683610-54688200 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0000OZ CIL_0000OZ_0003 CGP 13:54621784-54693907
CIL_0000OY CIL_0000OY_0003 CGP 13:54679399-54736662

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274811 RNF44-001 protein_coding Homo_sapiens 0 641
ENST00000504160 RNF44-003 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000504434 RNF44-004 retained_intron Homo_sapiens 0 250
ENST00000513029 RNF44-002 nonsense_mediated_decay Homo_sapiens 0 420

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