C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000OY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068582-ENSDARG00000068586 CGP 7955 14:47726556-47863470
GeneTranscriptPositionBiotype
ENSDARG00000068582 (rnf44)
ring finger protein 44 		ENSDART00000099235 (rnf44-001) 47726556-47794210 protein_coding
ENSDART00000139691 (rnf44-003) 47774371-47786791 retained_intron
ENSDART00000146134 (rnf44-004) 47743955-47748253 protein_coding
ENSDART00000146918 (rnf44-002) 47762124-47786841 processed_transcript
ENSDARG00000068586 (CDHR2 (1 of 2))
cadherin-related family member 2 		ENSDART00000099244 (CDHR2 (1 of 2)-201) 47823186-47863470 protein_coding
CIL_0000OY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146083-ENSG00000074276 CGP 9606 5:176526697-176595974
GeneTranscriptPositionBiotype
ENSG00000074276 (CDHR2)
cadherin-related family member 2 		ENST00000261944 (CDHR2-003) 176549391-176595768 protein_coding
ENST00000416365 (CDHR2-007) 176590601-176591690 retained_intron
ENST00000506348 (CDHR2-002) 176565306-176595697 protein_coding
ENST00000508085 (CDHR2-006) 176586659-176589570 retained_intron
ENST00000510124 (CDHR2-004) 176543541-176568767 nonsense_mediated_decay
ENST00000510636 (CDHR2-001) 176542511-176595974 protein_coding
ENST00000513031 (CDHR2-005) 176586651-176590661 retained_intron
ENSG00000146083 (RNF44)
ring finger protein 44 		ENST00000274811 (RNF44-001) 176526697-176537420 protein_coding
ENST00000504160 (RNF44-003) 176530937-176537296 nonsense_mediated_decay
ENST00000504434 (RNF44-004) 176531882-176537880 retained_intron
ENST00000506378 (RNF44-007) 176528939-176530645 protein_coding
ENST00000508478 (RNF44-005) 176529488-176530610 retained_intron
ENST00000509404 (RNF44-008) 176532480-176536330 processed_transcript
ENST00000513029 (RNF44-002) 176528958-176538025 nonsense_mediated_decay
ENST00000515051 (RNF44-006) 176529078-176529808 retained_intron
ENSG00000169258 (GPRIN1)
G protein regulated inducer of neurite outgrowth 1 		ENST00000303991 (GPRIN1-001) 176595802-176610133 protein_coding
ENSG00000243959 (RN7SL684P)
RNA, 7SL, cytoplasmic 684, pseudogene 		ENST00000465665 (RN7SL684P-201) 176547433-176547726 misc_RNA
CIL_0000OY_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034928-ENSMUSG00000034918 CGP 10090 13:54679399-54736662
GeneTranscriptPositionBiotype
ENSMUSG00000034918 (Cdhr2)
cadherin-related family member 2 		ENSMUST00000037145 (Cdhr2-001) 54701461-54736662 protein_coding
ENSMUSG00000034928 (Rnf44)
ring finger protein 44 		ENSMUST00000037422 (Rnf44-003) 54679410-54693847 protein_coding
ENSMUST00000122935 (Rnf44-013) 54683706-54688257 protein_coding
ENSMUST00000123333 (Rnf44-015) 54684030-54687253 processed_transcript
ENSMUST00000125871 (Rnf44-001) 54679401-54688094 protein_coding
ENSMUST00000125927 (Rnf44-007) 54683610-54688200 protein_coding
ENSMUST00000126717 (Rnf44-006) 54683052-54693846 protein_coding
ENSMUST00000128038 (Rnf44-016) 54683485-54684407 retained_intron
ENSMUST00000128257 (Rnf44-005) 54681565-54688259 protein_coding
ENSMUST00000129881 (Rnf44-010) 54683128-54687654 protein_coding
ENSMUST00000134177 (Rnf44-008) 54683760-54688274 protein_coding
ENSMUST00000134862 (Rnf44-002) 54679410-54693907 protein_coding
ENSMUST00000144052 (Rnf44-009) 54684041-54693850 processed_transcript
ENSMUST00000145215 (Rnf44-017) 54682647-54684072 retained_intron
ENSMUST00000145397 (Rnf44-014) 54683964-54693812 protein_coding
ENSMUST00000146931 (Rnf44-011) 54683992-54687808 protein_coding
ENSMUST00000150626 (Rnf44-012) 54684050-54688273 protein_coding
ENSMUST00000150806 (Rnf44-004) 54679414-54688188 protein_coding
ENSMUST00000177950 (Rnf44-201) 54679399-54687808 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OY_0001ENSDARG00000068582ENSDART00000099235ENSDART00000139691ENSDART00000146134ENSDART00000146918ENSDARG00000068586ENSDART00000099244CIL_0000OY_0002ENSG00000074276ENST00000261944ENST00000416365ENST00000506348ENST00000508085ENST00000510124ENST00000510636ENST00000513031ENSG00000146083ENST00000274811ENST00000504160ENST00000504434ENST00000506378ENST00000508478ENST00000509404ENST00000513029ENST00000515051ENSG00000169258ENST00000303991ENSG00000243959ENST00000465665CIL_0000OY_0003ENSMUSG00000034918ENSMUST00000037145ENSMUSG00000034928ENSMUST00000037422ENSMUST00000122935ENSMUST00000123333ENSMUST00000125871ENSMUST00000125927ENSMUST00000126717ENSMUST00000128038ENSMUST00000128257ENSMUST00000129881ENSMUST00000134177ENSMUST00000134862ENSMUST00000144052ENSMUST00000145215ENSMUST00000145397ENSMUST00000146931ENSMUST00000150626ENSMUST00000150806ENSMUST00000177950
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OY_0001ENSDARG00000068582ENSDART00000099235ENSDART00000139691ENSDART00000146134ENSDART00000146918ENSDARG00000068586ENSDART00000099244CIL_0000OY_0002ENSG00000074276ENST00000261944ENST00000506348ENST00000508085ENST00000510636ENSG00000146083ENST00000274811ENST00000504160ENST00000508478ENST00000513029ENSG00000169258ENST00000303991ENSG00000243959ENST00000465665CIL_0000OY_0003ENSMUSG00000034918ENSMUST00000037145ENSMUSG00000034928ENSMUST00000037422ENSMUST00000125871ENSMUST00000128257ENSMUST00000134862ENSMUST00000145215ENSMUST00000150806ENSMUST00000177950
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000068582 ENSDART00000099235 N/A N/A N/A 5.017±3.51 N/A N/A 1.778±0.71 1.290±0.34 0.031±0.00 N/A 0.403±0.00 N/A N/A N/A
ENSDART00000139691 N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A N/A N/A N/A N/A
ENSDART00000146134 N/A N/A N/A N/A N/A N/A 4.709±0.32 6.055±0.00 0.345±0.00 N/A 1.886±0.00 N/A N/A N/A
ENSDART00000146918 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A
ENSDARG00000068586 ENSDART00000099244 N/A N/A N/A 0.046±0.02 N/A N/A 0.056±0.00 0.244±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074276 ENST00000261944 N/A N/A N/A N/A N/A 4.747±0.00 N/A 2.735±0.00 6.451±0.00 N/A N/A 1.221±0.00 N/A 0.772±0.00
ENST00000416365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506348 N/A N/A 0.542±0.00 N/A 0.398±0.00 0.276±0.00 0.008±0.00 2.563±0.00 N/A 0.036±0.00 N/A 0.325±0.00 N/A N/A
ENST00000508085 N/A N/A N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510636 N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A 0.099±0.00 N/A N/A 0.291±0.00 N/A N/A
ENST00000513031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146083 ENST00000274811 6.208±0.00 13.608±0.00 1.238±0.00 5.908±0.00 4.104±0.00 4.180±0.00 3.761±0.00 8.693±0.00 0.816±0.00 10.083±0.00 1.621±0.00 8.266±0.00 5.576±4.35 4.765±0.00
ENST00000504160 N/A N/A N/A N/A 1.176±0.00 N/A N/A 0.422±0.00 0.712±0.00 0.475±0.00 N/A N/A N/A N/A
ENST00000504434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508478 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.423±0.00 2.657±0.00 N/A N/A 13.930±0.00
ENST00000509404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.650±0.00
ENST00000515051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169258 ENST00000303991 0.629±0.00 0.359±0.00 N/A 7.137±5.45 0.227±0.14 0.517±0.00 0.252±0.00 N/A N/A 0.392±0.34 0.044±0.00 0.722±0.75 0.645±0.03 1.845±0.36
ENSG00000243959 ENST00000465665 N/A N/A 0.343±0.00 N/A N/A 0.396±0.28 N/A 0.430±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034918 ENSMUST00000037145 0.034±0.02 0.014±0.00 0.010±0.00 0.079±0.03 0.028±0.01 166.880±9.60 0.014±0.01 15.635±2.32 3.598±3.57 0.253±0.25 N/A 0.132±0.07 8.461±8.69 0.194±0.06
ENSMUSG00000034928 ENSMUST00000037422 16.576±1.97 32.765±4.49 14.253±0.99 8.721±0.77 22.416±10.63 21.807±5.47 8.736±1.68 18.903±4.59 7.965±2.71 18.586±5.85 3.106±0.60 16.376±3.99 21.089±10.82 1.502±0.00
ENSMUST00000122935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.894±0.00 N/A N/A 6.553±5.67
ENSMUST00000125927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.479±2.18 N/A 70.814±35.30
ENSMUST00000129881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134862 7.273±2.67 29.687±9.38 10.623±0.46 16.636±7.08 15.371±12.65 35.285±11.97 4.585±1.81 13.944±3.60 7.601±2.75 20.949±1.50 2.216±1.06 22.310±8.86 9.591±3.57 20.160±3.87
ENSMUST00000144052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145215 N/A N/A N/A N/A 21.479±0.00 41.600±0.00 N/A N/A N/A N/A N/A 58.650±5.16 N/A N/A
ENSMUST00000145397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150806 3.756±0.00 18.183±0.00 N/A N/A N/A N/A 2.552±0.00 7.399±0.00 N/A N/A 1.877±0.86 6.781±2.57 15.129±0.00 N/A
ENSMUST00000177950 N/A N/A 4.457±0.27 13.701±5.21 N/A N/A N/A N/A 2.589±0.81 N/A 0.927±0.05 6.732±1.84 9.158±4.89 1.363±0.00

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