C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: karyopherin (importin) alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126010 Kpna6-002 ENSMUSG00000003731 10090 - 4:129657447-129672528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000126010
Transcript ID Placenta Testis
ENSMUST00000126010 134.848±0.00 461.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IDA protein import into nucleus
GO:0008565 IDA protein transporter activity
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0060135 IMP maternal process involved in female pregnancy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373625 KPNA6-001 protein_coding Homo_sapiens 0 372
ENST00000446515 KPNA6-004 protein_coding Homo_sapiens 8e-39 165
ENST00000469790 KPNA6-003 processed_transcript Homo_sapiens 0 370
ENST00000471599 KPNA6-002 nonsense_mediated_decay Homo_sapiens 0 294

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