C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: katanin p60 subunit A-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126153 Katnal2-001 ENSMUSG00000025420 10090 - 18:76977148-77047308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126153
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126153 0.263±0.08 0.264±0.04 1.625±0.14 0.218±0.16 0.074±0.00 0.092±0.06 0.218±0.12 0.097±0.00 0.766±0.37 0.396±0.18 27.155±8.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DZ CIL_0008DZ_0002 VISTA 18:76562703-77163723

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006200 IEA ATP catabolic process
GO:0008017 IEA microtubule binding
GO:0008150 ND biological_process
GO:0008568 IEA microtubule-severing ATPase activity
GO:0051013 IEA microtubule severing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245121 KATNAL2-001 protein_coding Homo_sapiens 0 1476
ENST00000356157 KATNAL2-010 protein_coding Homo_sapiens 0 1637
ENST00000585469 KATNAL2-009 protein_coding Homo_sapiens 0 573
ENST00000586198 KATNAL2-007 protein_coding Homo_sapiens 0 455
ENST00000588433 KATNAL2-006 protein_coding Homo_sapiens 0 743
ENST00000591522 KATNAL2-002 protein_coding Homo_sapiens 0 248
ENST00000592005 KATNAL2-008 protein_coding Homo_sapiens 0 233

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