C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 78, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126198 Fam78b-001 ENSMUSG00000060568 10090 + 1:167001466-167079281 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000126198
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000126198 3.159±1.23 2.420±0.54 6.458±1.00 9.914±3.15 1.781±0.39 0.713±0.20 1.117±0.30 0.722±0.20 0.111±0.05 1.796±0.56 3.569±0.78 18.789±9.45 0.275±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091431 FAM78B (1 of 2)-201 protein_coding Danio_rerio 0 375
ENST00000247295 FAM78A-003 processed_transcript Homo_sapiens 0 270
ENST00000338353 FAM78B-201 protein_coding Homo_sapiens 0 1694
ENST00000354422 FAM78B-001 protein_coding Homo_sapiens 0 1696
ENST00000372269 FAM78A-002 protein_coding Homo_sapiens 0 270
ENST00000372271 FAM78A-001 protein_coding Homo_sapiens 0 377
ENST00000435676 FAM78B-002 nonsense_mediated_decay Homo_sapiens 0 1772
ENST00000441649 FAM78B-003 nonsense_mediated_decay Homo_sapiens 0 1853
ENST00000456900 FAM78B-004 nonsense_mediated_decay Homo_sapiens 0 1962
ENST00000464831 FAM78A-004 protein_coding Homo_sapiens 0 270

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