C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126341 Pafah1b1-005 ENSMUSG00000020745 10090 - 11:74673949-74724335 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000126341
Transcript ID Liver
ENSMUST00000126341 1.470±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000031470 pafah1b1b-001 protein_coding Danio_rerio 0 497
ENST00000397193 PAFAH1B1-012 processed_transcript Homo_sapiens 0 939
ENST00000397195 PAFAH1B1-001 protein_coding Homo_sapiens 0 3121
ENST00000398171 AC133644.3-001 processed_pseudogene Homo_sapiens 0 773
ENST00000449539 AC068491.3-001 transcribed_processed_pseudogene Homo_sapiens 0 773
ENST00000570400 PAFAH1B1-008 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000571289 PAFAH1B1-009 retained_intron Homo_sapiens 0 267
ENST00000571495 PAFAH1B1-006 retained_intron Homo_sapiens 0 898
ENST00000572915 PAFAH1B1-003 processed_transcript Homo_sapiens 0 481
ENST00000574468 PAFAH1B1-004 protein_coding Homo_sapiens 0 736
ENST00000574816 PAFAH1B1-010 processed_transcript Homo_sapiens 0 412
ENST00000575477 PAFAH1B1-005 processed_transcript Homo_sapiens 0 303
ENST00000576586 PAFAH1B1-011 protein_coding Homo_sapiens 0 553
ENST00000604843 AC068491.3-002 processed_transcript Homo_sapiens 0 571
ENST00000609078 PAFAH1B1-014 processed_transcript Homo_sapiens 0 848
ENST00000610190 PAFAH1B1-013 retained_intron Homo_sapiens 0 274

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