C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126846 Abcb1a-002 ENSMUSG00000040584 10090 + 5:8719819-8748570 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126846
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126846 2.045±0.52 0.953±0.29 2.408±0.00 0.476±0.06 0.946±0.33 25.280±7.25 1.152±0.06 1.031±0.29 0.525±0.25 1.911±0.02 0.705±0.23 2.066±1.33 1.828±0.37 0.275±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265724 ABCB1-001 protein_coding Homo_sapiens 0 1903
ENST00000488737 ABCB1-007 processed_transcript Homo_sapiens 0 1659
ENST00000491360 ABCB1-010 retained_intron Homo_sapiens 0 448
ENST00000496821 ABCB1-006 processed_transcript Homo_sapiens 0 1083
ENST00000543898 ABCB1-201 protein_coding Homo_sapiens 0 1903
ENST00000622132 ABCB1-202 protein_coding Homo_sapiens 0 1932

Loading