C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ATP-binding cassette, sub-family B (MDR/TAP), member 9 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000126856  |
Abcb9-004 |
ENSMUSG00000029408 |
10090 | - |
5:124071711-124090262  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00084E | CIL_00084E_0002 | VISTA | 5:123871507-124476501 |
| CIL_00006P | CIL_00006P_0003 | CGP | 5:124004641-124095798 |
| CIL_0002PC | CIL_0002PC_0002 | CGP | 5:124061530-124115483 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005524 | IEA | ATP binding |
| GO:0005764 | ISO | lysosome |
| GO:0005789 | ISA | endoplasmic reticulum membrane |
| GO:0016021 | IBA | integral component of membrane |
| GO:0042626 | IBA | ATPase activity, coupled to transmembrane movement of substances |
| GO:0055085 | IBA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000280560
|
ABCB9-004 | protein_coding | Homo_sapiens | 0 | 893 |
|
ENST00000344275
|
ABCB9-006 | protein_coding | Homo_sapiens | 0 | 893 |
|
ENST00000346530
|
ABCB9-201 | protein_coding | Homo_sapiens | 0 | 893 |
|
ENST00000392439
|
ABCB9-002 | protein_coding | Homo_sapiens | 0 | 893 |
|
ENST00000426173
|
ABCB9-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 1620 |
|
ENST00000442028
|
ABCB9-202 | protein_coding | Homo_sapiens | 0 | 893 |
|
ENST00000442833
|
ABCB9-005 | protein_coding | Homo_sapiens | 0 | 893 |
|
ENST00000536976
|
ABCB9-014 | protein_coding | Homo_sapiens | 0 | 568 |
|
ENST00000537276
|
ABCB9-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 1188 |
|
ENST00000538895
|
ABCB9-009 | retained_intron | Homo_sapiens | 0 | 867 |
|
ENST00000540285
|
ABCB9-003 | protein_coding | Homo_sapiens | 0 | 1188 |
|
ENST00000540971
|
ABCB9-012 | protein_coding | Homo_sapiens | 0 | 568 |
|
ENST00000541424
|
ABCB9-013 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000541983
|
ABCB9-017 | processed_transcript | Homo_sapiens | 0 | 204 |
|
ENST00000542448
|
ABCB9-016 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000542678
|
ABCB9-001 | protein_coding | Homo_sapiens | 0 | 893 |
|
ENST00000543935
|
ABCB9-011 | protein_coding | Homo_sapiens | 0 | 287 |
|
ENST00000545373
|
ABCB9-019 | protein_coding | Homo_sapiens | 2.8026e-45 | 185 |
|
ENST00000546077
|
ABCB9-015 | protein_coding | Homo_sapiens | 0 | 422 |
|
ENST00000546289
|
ABCB9-018 | protein_coding | Homo_sapiens | 0 | 806 |
