C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150967-ENSG00000150967 CGP 9606 12:122920951-122981649
GeneTranscriptPositionBiotype
ENSG00000182196 (ARL6IP4)
ADP-ribosylation factor-like 6 interacting protein 4 		ENST00000315580 (ARL6IP4-001) 122980060-122982909 protein_coding
ENST00000357866 (ARL6IP4-011) 122981140-122982676 protein_coding
ENST00000392433 (ARL6IP4-010) 122980928-122982909 retained_intron
ENST00000392435 (ARL6IP4-018) 122980191-122982711 protein_coding
ENST00000412505 (ARL6IP4-021) 122980703-122982860 protein_coding
ENST00000413381 (ARL6IP4-013) 122980231-122982538 protein_coding
ENST00000426960 (ARL6IP4-014) 122980263-122982795 protein_coding
ENST00000439686 (ARL6IP4-019) 122980748-122982706 protein_coding
ENST00000442210 (ARL6IP4-016) 122980696-122982765 retained_intron
ENST00000453766 (ARL6IP4-003) 122980189-122982909 protein_coding
ENST00000454885 (ARL6IP4-004) 122980495-122982909 protein_coding
ENST00000456762 (ARL6IP4-015) 122981137-122982731 protein_coding
ENST00000536073 (ARL6IP4-022) 122981953-122982908 retained_intron
ENST00000536502 (ARL6IP4-007) 122980721-122982873 retained_intron
ENST00000539576 (ARL6IP4-012) 122980682-122982906 retained_intron
ENST00000539770 (ARL6IP4-005) 122980179-122982908 nonsense_mediated_decay
ENST00000540382 (ARL6IP4-009) 122980733-122982883 retained_intron
ENST00000540708 (ARL6IP4-006) 122980716-122982890 retained_intron
ENST00000542099 (ARL6IP4-017) 122980191-122982073 protein_coding
ENST00000543566 (ARL6IP4-002) 122980060-122982913 protein_coding
CIL_0002PC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029408-ENSMUSG00000023707 CGP 10090 5:124061530-124115483
GeneTranscriptPositionBiotype
ENSMUSG00000023707 (Ogfod2)
2-oxoglutarate and iron-dependent oxygenase domain containing 2 		ENSMUST00000024470 (Ogfod2-001) 124112297-124115483 protein_coding
ENSMUST00000119269 (Ogfod2-002) 124112321-124115476 protein_coding
ENSMUST00000130140 (Ogfod2-003) 124112321-124115085 retained_intron
ENSMUST00000131094 (Ogfod2-004) 124112340-124114374 retained_intron
ENSMUST00000136955 (Ogfod2-006) 124113303-124114882 retained_intron
ENSMUST00000148365 (Ogfod2-005) 124112850-124114217 retained_intron
ENSMUSG00000029408 (Abcb9)
ATP-binding cassette, sub-family B (MDR/TAP), member 9 		ENSMUST00000031354 (Abcb9-001) 124061530-124095798 protein_coding
ENSMUST00000126856 (Abcb9-004) 124071711-124090262 nonsense_mediated_decay
ENSMUST00000126970 (Abcb9-002) 124087943-124095786 retained_intron
ENSMUST00000141510 (Abcb9-003) 124071711-124090262 nonsense_mediated_decay
ENSMUST00000148392 (Abcb9-006) 124076119-124079820 processed_transcript
ENSMUST00000153433 (Abcb9-005) 124073325-124079090 retained_intron
ENSMUSG00000085433 (Gm16001)
predicted gene 16001 		ENSMUST00000127989 (Gm16001-001) 124111109-124112241 antisense
ENSMUST00000143062 (Gm16001-002) 124111138-124112217 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PC_0001ENSG00000182196ENST00000315580ENST00000357866ENST00000392433ENST00000392435ENST00000412505ENST00000413381ENST00000426960ENST00000439686ENST00000442210ENST00000453766ENST00000454885ENST00000456762ENST00000536073ENST00000536502ENST00000539576ENST00000539770ENST00000540382ENST00000540708ENST00000542099ENST00000543566CIL_0002PC_0002ENSMUSG00000023707ENSMUST00000024470ENSMUST00000119269ENSMUST00000130140ENSMUST00000131094ENSMUST00000136955ENSMUST00000148365ENSMUSG00000029408ENSMUST00000031354ENSMUST00000126856ENSMUST00000126970ENSMUST00000141510ENSMUST00000148392ENSMUST00000153433ENSMUSG00000085433ENSMUST00000127989ENSMUST00000143062
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PC_0001ENSG00000182196ENST00000315580ENST00000412505ENST00000413381ENST00000426960ENST00000439686ENST00000453766ENST00000454885ENST00000456762ENST00000536073ENST00000536502ENST00000543566CIL_0002PC_0002ENSMUSG00000023707ENSMUST00000024470ENSMUST00000119269ENSMUST00000130140ENSMUST00000131094ENSMUST00000136955ENSMUSG00000029408ENSMUST00000031354ENSMUST00000126970ENSMUST00000141510ENSMUSG00000085433ENSMUST00000127989ENSMUST00000143062
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182196 ENST00000315580 N/A N/A 2.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000357866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.250±0.00 45.994±0.00 44.940±5.94 N/A
ENST00000413381 N/A N/A N/A N/A 6.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.335±13.73 38.829±6.27 N/A
ENST00000439686 171.480±0.00 222.041±0.00 N/A 91.399±0.00 167.698±0.00 84.647±78.63 51.628±0.00 100.145±0.00 77.670±0.00 99.654±97.17 34.503±0.00 72.519±41.18 73.914±11.25 189.662±93.57
ENST00000442210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453766 N/A N/A N/A 8.846±0.00 N/A N/A N/A 8.449±0.00 N/A N/A 6.660±0.00 116.361±0.00 N/A N/A
ENST00000454885 N/A N/A N/A N/A 46.115±0.00 45.161±0.00 9.104±6.39 N/A N/A N/A 9.632±0.00 N/A N/A N/A
ENST00000456762 N/A N/A 13.985±0.00 36.113±10.08 11.884±0.00 8.243±0.00 5.749±0.00 32.610±0.00 21.198±0.00 7.189±0.00 17.586±0.00 10.203±0.00 N/A N/A
ENST00000536073 89.200±0.00 148.920±0.00 N/A N/A 76.525±0.00 N/A N/A 68.277±0.00 N/A N/A 18.685±0.00 87.966±0.00 65.448±14.28 N/A
ENST00000536502 N/A N/A N/A 57.558±0.00 N/A 45.107±0.00 14.835±0.00 41.063±0.00 30.096±0.00 N/A N/A N/A N/A N/A
ENST00000539576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543566 N/A N/A N/A N/A N/A 3.532±0.00 N/A N/A N/A 2.337±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023707 ENSMUST00000024470 12.706±2.61 30.388±2.13 10.076±1.18 12.482±5.33 13.909±2.62 19.325±2.20 6.171±0.45 17.600±2.14 11.192±4.93 10.367±1.36 4.301±0.93 15.668±3.87 9.503±2.40 15.489±4.29
ENSMUST00000119269 N/A N/A N/A N/A 5.037±0.00 5.431±0.18 N/A 3.068±0.40 1.317±0.34 4.414±0.00 1.001±0.08 4.607±0.92 3.165±1.64 4.029±0.45
ENSMUST00000130140 2.968±0.00 8.371±0.83 2.648±0.00 3.228±0.19 3.231±0.99 4.723±0.98 1.124±0.00 2.304±0.53 1.305±0.33 2.063±0.00 N/A 3.888±0.71 1.336±0.00 N/A
ENSMUST00000131094 N/A 27.445±8.86 N/A N/A 8.786±2.05 N/A N/A N/A N/A N/A N/A 12.337±0.16 N/A N/A
ENSMUST00000136955 N/A N/A N/A N/A 1.355±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029408 ENSMUST00000031354 2.339±0.62 4.209±1.06 0.513±0.05 3.380±2.34 2.918±1.15 1.902±0.28 1.426±0.41 1.568±0.19 0.509±0.16 1.605±0.23 1.875±0.58 0.852±0.46 1.935±2.00 4.337±2.61
ENSMUST00000126856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126970 1.408±0.62 N/A 0.306±0.04 N/A 1.723±0.49 N/A N/A 0.750±0.15 1.023±0.64 0.653±0.00 N/A 0.287±0.19 0.331±0.07 N/A
ENSMUST00000141510 N/A N/A N/A 3.711±0.00 0.530±0.00 N/A N/A N/A N/A N/A 0.600±0.00 N/A 0.339±0.00 1.990±0.00
ENSMUST00000148392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085433 ENSMUST00000127989 N/A N/A 1.661±0.00 0.480±0.14 1.174±0.00 4.062±0.00 0.950±0.00 1.550±0.65 0.606±0.18 N/A N/A 0.569±0.16 3.142±0.00 1.135±0.65
ENSMUST00000143062 N/A N/A 1.965±0.00 1.090±0.65 0.345±0.00 0.845±0.00 0.262±0.00 0.744±0.14 0.896±0.21 N/A 0.254±0.00 0.390±0.00 3.772±3.03 1.780±1.36

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