C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte antigen 6 complex, locus H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127095 Ly6h-001 ENSMUSG00000022577 10090 - 15:75564744-75567255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000127095
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000127095 2.646±1.33 0.461±0.09 0.054±0.01 74.318±11.36 0.634±0.27 0.227±0.11 0.087±0.00 0.185±0.23 0.040±0.00 0.076±0.00 4.306±1.05 0.115±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NV CIL_0002NV_0002 CGP 15:75449457-75567255
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0002NW CIL_0002NW_0002 CGP 15:75551268-75599481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342752 LY6H-001 protein_coding Homo_sapiens 0 824
ENST00000414417 LY6H-002 protein_coding Homo_sapiens 0 730
ENST00000430474 LY6H-003 protein_coding Homo_sapiens 0 640
ENST00000479685 LY6H-004 retained_intron Homo_sapiens 0 527
ENST00000610554 LY6H-202 protein_coding Homo_sapiens 0 640
ENST00000615409 LY6H-201 protein_coding Homo_sapiens 0 730
ENST00000615434 LY6H-203 protein_coding Homo_sapiens 0 730

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