C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ataxin 7-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127157 Atxn7l2-003 ENSMUSG00000048997 10090 - 3:108207082-108209571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000127157
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000127157 7.614±0.00 1.374±0.48 0.226±0.07 0.401±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369870 ATXN7L2-001 protein_coding Homo_sapiens 0 601
ENST00000463678 ATXN7L2-004 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000497545 ATXN7L2-003 retained_intron Homo_sapiens 0 573
ENST00000615509 ATXN7L2-201 protein_coding Homo_sapiens 0 601

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