C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 78, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128373 Fam78b-002 ENSMUSG00000060568 10090 + 1:167001589-167091009 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000128373
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000128373 0.478±0.12 1.059±0.06 1.871±0.63 7.860±5.49 0.480±0.22 0.209±0.03 0.242±0.03 0.157±0.05 0.031±0.00 0.753±0.10 0.504±0.12 0.413±0.17 3.161±1.96 0.024±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091431 FAM78B (1 of 2)-201 protein_coding Danio_rerio 0 366
ENST00000247295 FAM78A-003 processed_transcript Homo_sapiens 0 270
ENST00000338353 FAM78B-201 protein_coding Homo_sapiens 0 1502
ENST00000354422 FAM78B-001 protein_coding Homo_sapiens 0 1504
ENST00000372269 FAM78A-002 protein_coding Homo_sapiens 0 270
ENST00000372271 FAM78A-001 protein_coding Homo_sapiens 0 377
ENST00000435676 FAM78B-002 nonsense_mediated_decay Homo_sapiens 0 1905
ENST00000441649 FAM78B-003 nonsense_mediated_decay Homo_sapiens 0 1772
ENST00000456900 FAM78B-004 nonsense_mediated_decay Homo_sapiens 0 1897
ENST00000464831 FAM78A-004 protein_coding Homo_sapiens 0 270

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