C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: limb region 1 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128818 Lmbr1l-004 ENSMUSG00000022999 10090 - 15:98913502-98918055 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryENSMUST00000128818
Transcript ID Adrenal Breast Colon Ovary
ENSMUST00000128818 25.822±7.02 31.894±1.57 23.952±5.04 44.623±8.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000I CIL_00000I_0002 CGP 15:98893031-98918231
CIL_00000A CIL_00000A_0002 CGP 15:98903921-98934565

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267102 LMBR1L-001 protein_coding Homo_sapiens 0 418
ENST00000417750 LMBR1L-002 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000457164 LMBR1L-009 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000547382 LMBR1L-005 protein_coding Homo_sapiens 0 418
ENST00000547670 LMBR1L-004 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000547675 LMBR1L-019 protein_coding Homo_sapiens 0 409
ENST00000548983 LMBR1L-013 processed_transcript Homo_sapiens 0 303
ENST00000549296 LMBR1L-010 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000550137 LMBR1L-030 protein_coding Homo_sapiens 0 364
ENST00000550815 LMBR1L-014 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000550867 LMBR1L-006 retained_intron Homo_sapiens 0 407
ENST00000551115 LMBR1L-003 retained_intron Homo_sapiens 0 233
ENST00000551169 LMBR1L-015 nonsense_mediated_decay Homo_sapiens 1e-16 92
ENST00000551535 LMBR1L-011 retained_intron Homo_sapiens 0 364
ENST00000551782 LMBR1L-012 protein_coding Homo_sapiens 0 407
ENST00000551854 LMBR1L-008 protein_coding Homo_sapiens 0 189
ENST00000552153 LMBR1L-029 processed_transcript Homo_sapiens 0 233
ENST00000553204 LMBR1L-018 processed_transcript Homo_sapiens 0 418

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