C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: limb region 1 like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022999 Lmbr1l 10090 - 15:98903921-98918231 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023736 Lmbr1l-001 98903921-98918231 protein_coding
  ENSMUST00000109127 Lmbr1l-002 98903921-98916212 protein_coding
  ENSMUST00000123950 Lmbr1l-007 98906179-98908937 processed_transcript
  ENSMUST00000126159 Lmbr1l-003 98915176-98917750 processed_transcript
  ENSMUST00000127548 Lmbr1l-006 98907182-98909263 retained_intron
  ENSMUST00000128818 Lmbr1l-004 98913502-98918055 processed_transcript
  ENSMUST00000135051 Lmbr1l-005 98907880-98909460 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023736ENSMUST00000109127ENSMUST00000128818
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023736 10.158±2.71 6.559±2.15 5.654±1.61 1.100±0.00 14.811±4.99 12.977±3.03 4.933±0.53 9.765±2.22 4.957±1.64 13.218±1.95 1.860±0.31 15.957±5.04 7.406±3.05 81.059±54.91
ENSMUST00000109127 N/A 2.568±0.70 N/A 0.352±0.00 N/A N/A N/A N/A N/A 2.857±0.00 0.750±0.10 2.627±1.11 3.030±0.00 N/A
ENSMUST00000128818 N/A 25.822±7.02 N/A N/A 31.894±1.57 23.952±5.04 N/A N/A N/A N/A N/A 44.623±8.91 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000I CIL_00000I_0002 CGP 15:98893031-98918231
CIL_00000A CIL_00000A_0002 CGP 15:98903921-98934565

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004745 lmbr1l limb region 1 like protein_coding Danio_rerio
ENSG00000139636 LMBR1L limb development membrane protein 1-like protein_coding Homo_sapiens

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