C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pogo transposable element with KRAB domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128861 Pogk-003 ENSMUSG00000040596 10090 - 1:166396169-166409863 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000128861
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000128861 4.666±0.00 0.776±0.00 5.502±0.00 1.022±0.03 1.877±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367875 POGK-003 protein_coding Homo_sapiens 0 2130
ENST00000367876 POGK-001 protein_coding Homo_sapiens 0 2089
ENST00000449930 POGK-002 protein_coding Homo_sapiens 0 684

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