C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pogo transposable element with KRAB domain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040596 Pogk 10090 - 1:166384622-166409863 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079972 Pogk-201 166384625-166409782 protein_coding
  ENSMUST00000111411 Pogk-202 166393614-166409828 protein_coding
  ENSMUST00000127596 Pogk-005 166403282-166409289 protein_coding
  ENSMUST00000128861 Pogk-003 166396169-166409863 protein_coding
  ENSMUST00000131487 Pogk-002 166393610-166409391 protein_coding
  ENSMUST00000135673 Pogk-001 166384622-166409782 protein_coding
  ENSMUST00000148243 Pogk-004 166395397-166409787 nonsense_mediated_decay
  ENSMUST00000169324 Pogk-203 166393614-166409828 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111411ENSMUST00000128861ENSMUST00000131487ENSMUST00000148243ENSMUST00000169324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111411 4.962±1.50 5.401±0.98 3.076±0.13 10.529±0.87 4.071±1.04 1.905±0.56 2.353±0.60 3.713±0.32 1.048±0.18 3.187±0.44 1.677±0.53 7.947±0.95 1.865±0.73 3.340±0.26
ENSMUST00000128861 N/A N/A N/A 4.666±0.00 N/A N/A N/A N/A N/A N/A 0.776±0.00 5.502±0.00 1.022±0.03 1.877±0.00
ENSMUST00000131487 N/A 2.045±0.00 N/A N/A N/A N/A N/A N/A 0.618±0.00 N/A 0.424±0.00 3.306±0.73 0.694±0.30 0.398±0.00
ENSMUST00000148243 3.028±0.54 5.848±0.88 N/A N/A 6.269±3.83 1.919±0.46 1.594±0.13 2.299±0.00 N/A N/A N/A 6.588±0.87 N/A 2.024±0.00
ENSMUST00000169324 1.840±0.00 3.342±0.32 1.698±0.00 6.350±3.37 4.920±2.22 1.068±0.13 1.586±0.00 N/A 0.991±0.25 1.511±0.00 0.777±0.30 3.549±0.99 0.786±0.34 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086690 POGK (1 of 3) pogo transposable element with KRAB domain protein_coding Danio_rerio
ENSDARG00000090358 POGK (2 of 3) pogo transposable element with KRAB domain protein_coding Danio_rerio
ENSDARG00000090587 POGK (3 of 3) pogo transposable element with KRAB domain protein_coding Danio_rerio
ENSG00000143157 POGK pogo transposable element with KRAB domain protein_coding Homo_sapiens

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