C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128908 Hdac10-004 ENSMUSG00000062906 10090 - 15:89123309-89128661 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaTestisENSMUST00000128908
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENSMUST00000128908 2.010±0.00 3.181±0.00 0.986±0.00 3.043±0.00 3.000±0.00 1.068±0.00 2.310±0.94 2.848±0.00 1.017±0.18 0.697±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000096 CIL_000096_0002 CGP 15:89098357-89128700
CIL_0006L4 CIL_0006L4_0002 CGP 15:89123307-89140703

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216271 HDAC10-001 protein_coding Homo_sapiens 0 601
ENST00000349505 HDAC10-008 protein_coding Homo_sapiens 0 200
ENST00000415993 HDAC10-002 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000448072 HDAC10-005 protein_coding Homo_sapiens 0 200
ENST00000454936 HDAC10-007 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000483222 HDAC10-004 processed_transcript Homo_sapiens 0 200
ENST00000498366 HDAC10-003 processed_transcript Homo_sapiens 0 200

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