C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline/serine-rich coiled-coil 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128962 Psrc1-010 ENSMUSG00000068744 10090 + 3:108386065-108386712 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000128962
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000128962 0.769±0.60 1.238±0.75 2.190±1.10 2.204±0.15 0.171±0.09 0.332±0.10 0.229±0.10 0.760±0.22 0.231±0.00 4.171±0.11 0.267±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369903 PSRC1-010 protein_coding Homo_sapiens 1e-33 148
ENST00000369904 PSRC1-002 protein_coding Homo_sapiens 0.00000000008 73
ENST00000369907 PSRC1-001 protein_coding Homo_sapiens 1e-33 148
ENST00000369909 PSRC1-201 protein_coding Homo_sapiens 1e-33 148
ENST00000409138 PSRC1-003 protein_coding Homo_sapiens 0.00000000009 73
ENST00000409267 PSRC1-009 protein_coding Homo_sapiens 1e-33 148
ENST00000418914 PSRC1-006 protein_coding Homo_sapiens 0.00000000005 73
ENST00000429031 PSRC1-005 protein_coding Homo_sapiens 0.00000000004 73
ENST00000474126 PSRC1-007 protein_coding Homo_sapiens 0.00000000002 73
ENST00000492431 PSRC1-004 retained_intron Homo_sapiens 2e-33 148

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