C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline/serine-rich coiled-coil 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068744 Psrc1 10090 + 3:108383839-108388231 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090561 Psrc1-001 108383839-108388179 protein_coding
  ENSMUST00000102629 Psrc1-002 108383859-108388231 protein_coding
  ENSMUST00000126461 Psrc1-005 108383879-108386383 processed_transcript
  ENSMUST00000128089 Psrc1-006 108383916-108385409 protein_coding
  ENSMUST00000128962 Psrc1-010 108386065-108386712 processed_transcript
  ENSMUST00000130906 Psrc1-003 108383852-108386602 processed_transcript
  ENSMUST00000133405 Psrc1-004 108383851-108385408 processed_transcript
  ENSMUST00000143309 Psrc1-008 108384394-108385944 processed_transcript
  ENSMUST00000145141 Psrc1-007 108383937-108386622 processed_transcript
  ENSMUST00000148509 Psrc1-009 108384857-108386704 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090561ENSMUST00000102629ENSMUST00000128089ENSMUST00000128962ENSMUST00000130906ENSMUST00000133405ENSMUST00000143309ENSMUST00000145141ENSMUST00000148509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090561 0.421±0.18 0.235±0.11 0.707±0.18 6.304±5.21 0.639±0.26 1.086±0.49 0.145±0.04 0.298±0.17 5.963±3.15 0.500±0.20 0.032±0.01 2.493±1.05 1.776±0.94 0.069±0.01
ENSMUST00000102629 0.641±0.00 0.311±0.15 0.424±0.11 3.689±1.95 N/A 1.226±0.29 N/A 0.227±0.00 2.776±1.43 N/A 0.009±0.00 2.206±0.00 1.249±0.63 N/A
ENSMUST00000128089 N/A 0.935±0.03 N/A 1.819±0.00 N/A N/A 0.133±0.00 0.193±0.00 N/A N/A N/A N/A N/A 0.567±0.23
ENSMUST00000128962 0.769±0.60 1.238±0.75 N/A N/A 2.190±1.10 2.204±0.15 0.171±0.09 0.332±0.10 0.229±0.10 0.760±0.22 0.231±0.00 4.171±0.11 N/A 0.267±0.18
ENSMUST00000130906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A N/A
ENSMUST00000133405 N/A 0.660±0.00 N/A N/A 0.537±0.00 N/A 0.108±0.02 0.225±0.00 0.241±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143309 N/A N/A N/A N/A 0.734±0.00 0.904±0.00 0.187±0.00 0.112±0.00 0.066±0.02 N/A 0.027±0.00 N/A N/A N/A
ENSMUST00000145141 N/A 0.229±0.00 N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000148509 N/A N/A N/A N/A N/A 1.058±0.00 N/A 0.192±0.00 N/A N/A N/A N/A N/A 0.670±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000922 ISS spindle pole
GO:0001578 IDA microtubule bundle formation
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005819 IDA spindle
GO:0005829 ISS cytosol
GO:0005876 ISS spindle microtubule
GO:0007080 ISS mitotic metaphase plate congression
GO:0008017 IDA microtubule binding
GO:0009987 IDA cellular process
GO:0015630 IDA microtubule cytoskeleton
GO:0030308 IMP negative regulation of cell growth
GO:0030496 IDA midbody
GO:0031116 IDA positive regulation of microtubule polymerization
GO:0045737 IMP positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0060236 ISS regulation of mitotic spindle organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134222 PSRC1 proline/serine-rich coiled-coil 1 protein_coding Homo_sapiens

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