C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline/serine-rich coiled-coil 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369904 PSRC1-002 ENSG00000134222 9606 - 1:109279556-109283115 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastMuscleOvaryPlacentaTestisENST00000369904
Transcript ID Bladder Brain Breast Muscle Ovary Placenta Testis
ENST00000369904 0.051±0.00 5.482±4.32 0.565±0.24 0.101±0.00 1.892±1.20 0.996±0.00 3.481±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098X CIL_00098X_0001 VISTA 1:108953074-109556228
CIL_00099A CIL_00099A_0001 VISTA 1:108974252-109576283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0001578 ISS microtubule bundle formation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005819 ISS spindle
GO:0005829 IDA cytosol
GO:0005876 IDA spindle microtubule
GO:0007080 IDA mitotic metaphase plate congression
GO:0008017 ISS microtubule binding
GO:0015630 ISS microtubule cytoskeleton
GO:0030308 ISS negative regulation of cell growth
GO:0030496 ISS midbody
GO:0031116 ISS positive regulation of microtubule polymerization
GO:0045737 ISS positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0060236 IDA regulation of mitotic spindle organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090561 Psrc1-001 protein_coding Mus_musculus 0 532
ENSMUST00000102629 Psrc1-002 protein_coding Mus_musculus 0 525
ENSMUST00000145141 Psrc1-007 processed_transcript Mus_musculus 0 501
ENSMUST00000126461 Psrc1-005 processed_transcript Mus_musculus 0 501
ENSMUST00000130906 Psrc1-003 processed_transcript Mus_musculus 0 501
ENSMUST00000128089 Psrc1-006 protein_coding Mus_musculus 0 457
ENSMUST00000148509 Psrc1-009 protein_coding Mus_musculus 0 440
ENSMUST00000133405 Psrc1-004 processed_transcript Mus_musculus 0 433
ENSMUST00000143309 Psrc1-008 processed_transcript Mus_musculus 0 422
ENSMUST00000128962 Psrc1-010 processed_transcript Mus_musculus 0.00000000008 73

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