C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129398 Hdac10-002 ENSMUSG00000062906 10090 - 15:89123307-89128653 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleOvaryPlacentaENSMUST00000129398
Transcript ID Brain Heart Liver Muscle Ovary Placenta
ENSMUST00000129398 2.008±1.34 1.262±0.00 1.247±0.11 1.347±0.51 3.678±2.87 1.002±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000096 CIL_000096_0002 CGP 15:89098357-89128700
CIL_0006L4 CIL_0006L4_0002 CGP 15:89123307-89140703

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216271 HDAC10-001 protein_coding Homo_sapiens 0 1282
ENST00000349505 HDAC10-008 protein_coding Homo_sapiens 0 701
ENST00000415993 HDAC10-002 nonsense_mediated_decay Homo_sapiens 0 568
ENST00000448072 HDAC10-005 protein_coding Homo_sapiens 0 715
ENST00000454936 HDAC10-007 nonsense_mediated_decay Homo_sapiens 0 701
ENST00000483222 HDAC10-004 processed_transcript Homo_sapiens 0 204
ENST00000498366 HDAC10-003 processed_transcript Homo_sapiens 0 490

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