C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IQ motif and Sec7 domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129815 Iqsec3-003 ENSMUSG00000040797 10090 - 6:121372933-121473623 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungMuscleOvaryPlacentaTestisENSMUST00000129815
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000129815 0.191±0.00 0.361±0.07 0.141±0.00 0.076±0.00 0.023±0.00 0.017±0.01 0.113±0.06 0.058±0.02 0.012±0.01 0.050±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005634 IBA nucleus
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382841 IQSEC3-001 protein_coding Homo_sapiens 0 1845
ENST00000537151 IQSEC3-006 processed_transcript Homo_sapiens 0 268
ENST00000538799 IQSEC3P1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000538872 IQSEC3-002 protein_coding Homo_sapiens 0 1694
ENST00000540907 IQSEC3-003 retained_intron Homo_sapiens 0 311
ENST00000544511 IQSEC3-005 processed_transcript Homo_sapiens 0 215
ENST00000571363 IQSEC3-001 protein_coding Homo_sapiens 0 1845
ENST00000574111 IQSEC3-003 retained_intron Homo_sapiens 0 311
ENST00000575724 IQSEC3-002 protein_coding Homo_sapiens 0 1690
ENST00000620521 RP11-476I15.6-001 processed_pseudogene Homo_sapiens 0 496
ENST00000621764 IQSEC3-201 protein_coding Homo_sapiens 0 606

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