C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FAD-dependent oxidoreductase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130072 Foxred1-005 ENSMUSG00000039048 10090 - 9:35204208-35210954 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000130072
Transcript ID Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000130072 2.537±0.00 2.946±0.71 3.173±1.04 2.431±0.31 1.718±0.24 2.451±0.09 1.585±0.00 1.617±0.42 2.939±0.61 1.463±0.23 1.279±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0002 VISTA 9:35123876-35727017
CIL_0002HQ CIL_0002HQ_0002 CGP 9:35200175-35247973

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263578 FOXRED1-002 protein_coding Homo_sapiens 0 778
ENST00000525083 FOXRED1-004 retained_intron Homo_sapiens 0 514
ENST00000525770 FOXRED1-005 nonsense_mediated_decay Homo_sapiens 0 778
ENST00000527004 FOXRED1-003 nonsense_mediated_decay Homo_sapiens 0 874
ENST00000530642 FOXRED1-008 retained_intron Homo_sapiens 0 662
ENST00000532101 FOXRED1-010 retained_intron Homo_sapiens 1e-32 145
ENST00000532125 FOXRED1-001 protein_coding Homo_sapiens 0 778
ENST00000532590 FOXRED1-017 retained_intron Homo_sapiens 0 372
ENST00000533395 FOXRED1-016 retained_intron Homo_sapiens 0 399
ENST00000534011 FOXRED1-006 processed_transcript Homo_sapiens 0 778
ENST00000534315 FOXRED1-007 retained_intron Homo_sapiens 0 880

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