C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130116 Sema3e-002 ENSMUSG00000063531 10090 + 5:14025276-14254314 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000130116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000130116 0.505±0.45 0.084±0.03 0.089±0.01 1.308±1.23 0.171±0.07 0.484±0.14 0.104±0.04 0.287±0.12 0.016±0.01 10.376±0.93 0.016±0.00 0.582±0.27 8.488±7.04 0.225±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CW CIL_0003CW_0002 CGP 5:14025276-14860184

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307792 SEMA3E-001 protein_coding Homo_sapiens 0 1615
ENST00000427262 SEMA3E-002 protein_coding Homo_sapiens 0 1615
ENST00000442159 SEMA3E-004 protein_coding Homo_sapiens 0 592
ENST00000453333 SEMA3E-003 nonsense_mediated_decay Homo_sapiens 8e-22 108

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