C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | talin 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000130353  |
Tln1-004 |
ENSMUSG00000028465 |
10090 | - |
4:43555106-43558460  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007BX | CIL_0007BX_0002 | CGP | 4:43514711-43562691 |
| CIL_0007C0 | CIL_0007C0_0002 | CGP | 4:43531519-43567060 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005925 | IDA | focal adhesion |
| GO:0007016 | IEA | cytoskeletal anchoring at plasma membrane |
| GO:0007044 | IMP | cell-substrate junction assembly |
| GO:0030866 | IMP | cortical actin cytoskeleton organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000013609
|
tln1-201 | protein_coding | Danio_rerio | 0 | 538 |
|
ENSDART00000078135
|
tln1-001 | protein_coding | Danio_rerio | 0 | 538 |
|
ENST00000314888
|
TLN1-001 | protein_coding | Homo_sapiens | 0 | 1016 |
|
ENST00000378192
|
TLN1-002 | retained_intron | Homo_sapiens | 0 | 1016 |
