C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: talin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000078135 tln1-001 ENSDARG00000005333 7955 + 10:8107187-8299534 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSDART00000078135
Transcript ID Heart Kidney
ENSDART00000078135 10.157±4.20 8.473±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 IEA actin binding
GO:0005158 IEA insulin receptor binding
GO:0005198 IEA structural molecule activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005856 IEA cytoskeleton
GO:0005925 IEA focal adhesion
GO:0007016 IEA cytoskeletal anchoring at plasma membrane
GO:0007155 IEA cell adhesion
GO:0015629 IEA actin cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030187 Tln1-001 protein_coding Mus_musculus 0 3901
ENSMUST00000130353 Tln1-004 protein_coding Mus_musculus 0 538
ENSMUST00000130670 Tln1-003 processed_transcript Mus_musculus 0 571
ENST00000306829 TLN2-201 protein_coding Homo_sapiens 0 2338
ENST00000314888 TLN1-001 protein_coding Homo_sapiens 0 3868
ENST00000378192 TLN1-002 retained_intron Homo_sapiens 0 627
ENST00000561311 TLN2-001 protein_coding Homo_sapiens 0 2338

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