C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007C0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137076-ENSG00000107175 CGP 9606 9:35696948-35737007
GeneTranscriptPositionBiotype
ENSG00000107175 (CREB3)
cAMP responsive element binding protein 3
ENST00000353704 (CREB3-001) 35732335-35737004 protein_coding
ENST00000486056 (CREB3-002) 35732598-35736860 processed_transcript
ENST00000613913 (CREB3-201) 35732320-35737007 protein_coding
ENSG00000137076 (TLN1)
talin 1
ENST00000314888 (TLN1-001) 35696948-35732395 protein_coding
ENST00000378192 (TLN1-002) 35723104-35732104 retained_intron
ENST00000464379 (TLN1-005) 35703559-35707874 processed_transcript
ENST00000465002 (TLN1-007) 35703783-35704415 retained_intron
ENST00000466916 (TLN1-008) 35703560-35704193 retained_intron
ENST00000486788 (TLN1-006) 35704323-35706198 retained_intron
ENST00000489255 (TLN1-003) 35698044-35699328 processed_transcript
ENST00000495712 (TLN1-004) 35707356-35707967 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007C0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028465-ENSMUSG00000028466 CGP 10090 4:43531519-43567060
GeneTranscriptPositionBiotype
ENSMUSG00000028465 (Tln1)
talin 1
ENSMUST00000030187 (Tln1-001) 43531519-43562422 protein_coding
ENSMUST00000123985 (Tln1-002) 43559343-43562691 processed_transcript
ENSMUST00000125509 (Tln1-006) 43546822-43551271 protein_coding
ENSMUST00000126078 (Tln1-005) 43555564-43555946 processed_transcript
ENSMUST00000127262 (Tln1-008) 43553451-43554451 processed_transcript
ENSMUST00000130353 (Tln1-004) 43555106-43558460 protein_coding
ENSMUST00000130670 (Tln1-003) 43554514-43562157 processed_transcript
ENSMUST00000134623 (Tln1-007) 43545410-43547647 protein_coding
ENSMUSG00000028466 (Creb3)
cAMP responsive element binding protein 3
ENSMUST00000102944 (Creb3-001) 43562332-43567060 protein_coding
ENSMUST00000126277 (Creb3-005) 43563267-43566527 retained_intron
ENSMUST00000132631 (Creb3-003) 43562947-43565316 protein_coding
ENSMUST00000138623 (Creb3-004) 43566015-43566704 retained_intron
ENSMUST00000159923 (Creb3-006) 43563430-43565550 retained_intron
ENSMUST00000167751 (Creb3-201) 43562813-43566797 protein_coding
ENSMUSG00000028467 (Gba2)
glucosidase beta 2
ENSMUST00000030189 (Gba2-001) 43566928-43578873 protein_coding
ENSMUST00000128403 (Gba2-003) 43566928-43578089 retained_intron
ENSMUST00000130443 (Gba2-005) 43570762-43578636 protein_coding
ENSMUST00000139606 (Gba2-006) 43568394-43569642 retained_intron
ENSMUST00000144968 (Gba2-004) 43570356-43574054 processed_transcript
ENSMUST00000148426 (Gba2-007) 43566929-43578089 retained_intron
ENSMUST00000152251 (Gba2-002) 43566928-43578537 retained_intron

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C0_0001ENSG00000107175ENST00000353704ENST00000486056ENST00000613913ENSG00000137076ENST00000314888ENST00000378192ENST00000464379ENST00000465002ENST00000466916ENST00000486788ENST00000489255ENST00000495712CIL_0007C0_0002ENSMUSG00000028465ENSMUST00000030187ENSMUST00000123985ENSMUST00000125509ENSMUST00000126078ENSMUST00000127262ENSMUST00000130353ENSMUST00000130670ENSMUST00000134623ENSMUSG00000028466ENSMUST00000102944ENSMUST00000126277ENSMUST00000132631ENSMUST00000138623ENSMUST00000159923ENSMUST00000167751ENSMUSG00000028467ENSMUST00000030189ENSMUST00000128403ENSMUST00000130443ENSMUST00000139606ENSMUST00000144968ENSMUST00000148426ENSMUST00000152251
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C0_0001ENSG00000107175ENST00000353704ENST00000486056ENSG00000137076ENST00000314888ENST00000378192CIL_0007C0_0002ENSMUSG00000028465ENSMUST00000030187ENSMUSG00000028466ENSMUST00000102944ENSMUSG00000028467ENSMUST00000030189
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107175 ENST00000353704 N/A N/A N/A 9.857±0.00 N/A N/A N/A N/A N/A N/A N/A 37.583±0.00 N/A 63.283±0.00
ENST00000486056 N/A N/A N/A 24.530±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137076 ENST00000314888 39.548±0.00 86.688±0.00 8.873±0.00 5.792±2.88 61.657±44.14 52.245±42.32 12.970±7.91 23.661±17.76 20.626±6.95 19.520±6.83 54.909±0.00 42.743±36.30 52.873±2.01 22.699±5.94
ENST00000378192 N/A N/A 23.127±0.00 N/A N/A 24.754±0.00 9.830±0.00 N/A 54.998±0.00 N/A N/A N/A N/A N/A
ENST00000464379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028465 ENSMUST00000030187 49.602±8.73 88.311±24.81 41.207±4.20 10.989±0.87 66.377±14.09 47.410±8.57 22.732±2.93 36.875±10.09 15.711±7.36 96.162±16.84 7.869±2.42 81.182±32.85 52.568±26.06 7.621±0.45
ENSMUST00000123985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028466 ENSMUST00000102944 N/A N/A N/A 16.203±0.00 N/A N/A N/A N/A 19.829±0.68 N/A 13.330±0.67 N/A 83.545±11.34 N/A
ENSMUST00000126277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028467 ENSMUST00000030189 N/A N/A N/A 29.965±2.84 N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.225±3.98
ENSMUST00000128403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading